Spaces:
Runtime error
Runtime error
Decrease workload on CPUs
Browse files
app.py
CHANGED
|
@@ -72,9 +72,10 @@ def save_file(segmentation, path):
|
|
| 72 |
def infer(image_path):
|
| 73 |
with tempfile.TemporaryDirectory() as tmpdirname:
|
| 74 |
|
| 75 |
-
|
| 76 |
-
[image_path], tmpdirname, [0, 1, 2, 3, 4], cpu_only=False
|
| 77 |
-
|
|
|
|
| 78 |
filename = add_postfix(Path(image_path).name, "seg")
|
| 79 |
segmentation = sitk.ReadImage(tmpdirname + "/" + filename)
|
| 80 |
|
|
@@ -124,13 +125,6 @@ with gr.Blocks(css=css, title="MRSegmentator") as iface:
|
|
| 124 |
with gr.Column():
|
| 125 |
overlay_image_np = gr.AnnotatedImage(label="Axial View")
|
| 126 |
|
| 127 |
-
# pred_dict = gr.Label(label="Prediction")
|
| 128 |
-
# explanation= gr.Textbox(label="Classification Decision")
|
| 129 |
-
|
| 130 |
-
# with gr.Accordion("Additional Information", open=False):
|
| 131 |
-
# gradcam = gr.Image(label="GradCAM")
|
| 132 |
-
# cropped_boxed_array_disp = gr.Image(label="Bounding Box")
|
| 133 |
-
|
| 134 |
input_file.change(
|
| 135 |
utils.read_and_display,
|
| 136 |
inputs=[input_file, image_state, seg_state],
|
|
@@ -149,5 +143,4 @@ with gr.Blocks(css=css, title="MRSegmentator") as iface:
|
|
| 149 |
|
| 150 |
if __name__ == "__main__":
|
| 151 |
iface.queue()
|
| 152 |
-
# iface.launch(server_name='0.0.0.0', server_port=8080)
|
| 153 |
iface.launch()
|
|
|
|
| 72 |
def infer(image_path):
|
| 73 |
with tempfile.TemporaryDirectory() as tmpdirname:
|
| 74 |
|
| 75 |
+
if torch.cuda.is_available():
|
| 76 |
+
inference.infer([image_path], tmpdirname, [0, 1, 2, 3, 4], cpu_only=False, split_level=1)
|
| 77 |
+
else:
|
| 78 |
+
inference.infer([image_path], tmpdirname, [0], cpu_only=True, split_level=1)
|
| 79 |
filename = add_postfix(Path(image_path).name, "seg")
|
| 80 |
segmentation = sitk.ReadImage(tmpdirname + "/" + filename)
|
| 81 |
|
|
|
|
| 125 |
with gr.Column():
|
| 126 |
overlay_image_np = gr.AnnotatedImage(label="Axial View")
|
| 127 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 128 |
input_file.change(
|
| 129 |
utils.read_and_display,
|
| 130 |
inputs=[input_file, image_state, seg_state],
|
|
|
|
| 143 |
|
| 144 |
if __name__ == "__main__":
|
| 145 |
iface.queue()
|
|
|
|
| 146 |
iface.launch()
|