fix: save output in separate folder in CI
Browse files
.github/workflows/build.yml
CHANGED
|
@@ -70,17 +70,18 @@ jobs:
|
|
| 70 |
run: |
|
| 71 |
pip install gdown==4.4.0
|
| 72 |
mkdir samples
|
|
|
|
| 73 |
cd samples
|
| 74 |
gdown https://drive.google.com/uc?id=1shjSrFjS4PHE5sTku30PZTLPZpGu24o3
|
| 75 |
gdown https://drive.google.com/uc?id=1bNmls5o0Rxw5HvBF1IYnEzmpysYJaywN
|
| 76 |
|
| 77 |
- name: Test inference .nii
|
| 78 |
run: |
|
| 79 |
-
livermask --input samples --output
|
| 80 |
|
| 81 |
- name: Test inference .nii.gz
|
| 82 |
run: |
|
| 83 |
-
livermask --input samples --output
|
| 84 |
|
| 85 |
conda:
|
| 86 |
needs: build
|
|
@@ -115,10 +116,11 @@ jobs:
|
|
| 115 |
run: |
|
| 116 |
pip3 install gdown==4.4.0
|
| 117 |
mkdir samples
|
|
|
|
| 118 |
cd samples
|
| 119 |
gdown https://drive.google.com/uc?id=1shjSrFjS4PHE5sTku30PZTLPZpGu24o3
|
| 120 |
gdown https://drive.google.com/uc?id=1bNmls5o0Rxw5HvBF1IYnEzmpysYJaywN
|
| 121 |
|
| 122 |
- name: Test inference
|
| 123 |
run: |
|
| 124 |
-
livermask --input samples --output
|
|
|
|
| 70 |
run: |
|
| 71 |
pip install gdown==4.4.0
|
| 72 |
mkdir samples
|
| 73 |
+
mkdir results
|
| 74 |
cd samples
|
| 75 |
gdown https://drive.google.com/uc?id=1shjSrFjS4PHE5sTku30PZTLPZpGu24o3
|
| 76 |
gdown https://drive.google.com/uc?id=1bNmls5o0Rxw5HvBF1IYnEzmpysYJaywN
|
| 77 |
|
| 78 |
- name: Test inference .nii
|
| 79 |
run: |
|
| 80 |
+
livermask --input samples --output results --verbose --vessels
|
| 81 |
|
| 82 |
- name: Test inference .nii.gz
|
| 83 |
run: |
|
| 84 |
+
livermask --input samples --output results --verbose --vessels --extension .nii.gz
|
| 85 |
|
| 86 |
conda:
|
| 87 |
needs: build
|
|
|
|
| 116 |
run: |
|
| 117 |
pip3 install gdown==4.4.0
|
| 118 |
mkdir samples
|
| 119 |
+
mkdir results
|
| 120 |
cd samples
|
| 121 |
gdown https://drive.google.com/uc?id=1shjSrFjS4PHE5sTku30PZTLPZpGu24o3
|
| 122 |
gdown https://drive.google.com/uc?id=1bNmls5o0Rxw5HvBF1IYnEzmpysYJaywN
|
| 123 |
|
| 124 |
- name: Test inference
|
| 125 |
run: |
|
| 126 |
+
livermask --input samples --output results --verbose --vessels
|