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| import gradio as gr | |
| import requests | |
| import xml.etree.ElementTree as ET | |
| from langchain.vectorstores import Chroma | |
| from langchain.embeddings import HuggingFaceEmbeddings | |
| from langchain.memory import ConversationBufferMemory | |
| from transformers import pipeline, AutoModelForSequenceClassification, AutoTokenizer | |
| from loguru import logger | |
| import numpy as np | |
| import torch | |
| # --- DataIngestion Class with Query Expansion --- | |
| class DataIngestion: | |
| def __init__(self, api_url="http://export.arxiv.org/api/query"): | |
| self.api_url = api_url | |
| self.synonyms = { | |
| "RAG": "Retrieval-Augmented Generation", | |
| "AI": "Artificial Intelligence", | |
| "ML": "Machine Learning" | |
| } | |
| def expand_query(self, query): | |
| expanded = query | |
| for key, value in self.synonyms.items(): | |
| if key.lower() in query.lower(): | |
| expanded += f" OR {value}" | |
| logger.info(f"Expanded query: {expanded}") | |
| return expanded | |
| def fetch_papers(self, topic, max_results=5): | |
| expanded_query = self.expand_query(topic) | |
| url = f"{self.api_url}?search_query=ti:{expanded_query}+OR+ab:{expanded_query}&start=0&max_results={max_results}" | |
| logger.info(f"Fetching papers from: {url}") | |
| try: | |
| response = requests.get(url, timeout=10) | |
| response.raise_for_status() | |
| except requests.exceptions.RequestException as e: | |
| logger.error(f"Error fetching papers: {e}") | |
| return [], [], [] | |
| root = ET.fromstring(response.text) | |
| titles, abstracts, paper_ids = [], [], [] | |
| for entry in root.findall("{http://www.w3.org/2005/Atom}entry"): | |
| title = entry.find("{http://www.w3.org/2005/Atom}title").text.strip() | |
| abstract = entry.find("{http://www.w3.org/2005/Atom}summary").text.strip() | |
| paper_id_elem = entry.find("{http://www.w3.org/2005/Atom}id") | |
| paper_id = paper_id_elem.text.split("abs/")[-1].strip() if paper_id_elem is not None else "unknown" | |
| titles.append(title) | |
| abstracts.append(abstract) | |
| paper_ids.append(paper_id) | |
| logger.info(f"Fetched {len(abstracts)} papers.") | |
| return titles, abstracts, paper_ids | |
| # --- RetrievalModule Class with Reranking --- | |
| class RetrievalModule: | |
| def __init__(self, embedding_model="sentence-transformers/all-MiniLM-L6-v2", persist_dir="./chroma_db"): | |
| self.embeddings = HuggingFaceEmbeddings(model_name=embedding_model) | |
| self.vector_store = None | |
| self.persist_dir = persist_dir | |
| self.reranker_model = AutoModelForSequenceClassification.from_pretrained("cross-encoder/ms-marco-MiniLM-L-6-v2") | |
| self.reranker_tokenizer = AutoTokenizer.from_pretrained("cross-encoder/ms-marco-MiniLM-L-6-v2") | |
| def build_vector_store(self, abstracts, titles, paper_ids): | |
| if not abstracts: | |
| logger.warning("No abstracts provided. Skipping vector store creation.") | |
| return | |
| metadatas = [{"title": title, "paper_id": pid} for title, pid in zip(titles, paper_ids)] | |
| self.vector_store = Chroma.from_texts( | |
| texts=abstracts, embedding=self.embeddings, metadatas=metadatas, persist_directory=self.persist_dir | |
| ) | |
| self.vector_store.persist() | |
| logger.info("Chroma vector store built and persisted.") | |
| def rerank(self, query, retrieved): | |
| if not retrieved: | |
| return retrieved | |
| inputs = [f"{query} [SEP] {doc[0]}" for doc in retrieved] | |
| tokenized = self.reranker_tokenizer(inputs, return_tensors="pt", padding=True, truncation=True, max_length=512) | |
| with torch.no_grad(): | |
| scores = self.reranker_model(**tokenized).logits.squeeze().detach().numpy() | |
| ranked_indices = np.argsort(scores)[::-1] | |
| return [retrieved[i] for i in ranked_indices[:3]] | |
| def retrieve_relevant(self, query, k=5): | |
| if not self.vector_store: | |
| logger.warning("Vector store empty. Run `build_vector_store` first.") | |
| return [] | |
| top_docs = self.vector_store.similarity_search(query, k=k) | |
| retrieved = [(doc.page_content, doc.metadata) for doc in top_docs] | |
| reranked = self.rerank(query, retrieved) | |
| logger.info(f"Retrieved and reranked {len(reranked)} papers for query: '{query}'.") | |
| return reranked | |
| # --- Main Application Logic --- | |
| data_ingestion = DataIngestion() | |
| retrieval_module = RetrievalModule() | |
| generator = pipeline("text-generation", model="distilgpt2") | |
| memory = ConversationBufferMemory(memory_key="chat_history", return_messages=True) | |
| def process_query(query): | |
| """Retrieve and summarize the best papers with their sources.""" | |
| try: | |
| # Check chat history for follow-up context | |
| history = memory.load_memory_variables({})["chat_history"] | |
| if history and "more" in query.lower(): | |
| last_output = history[-1].content if history else "" # Fixed AIMessage access | |
| context = "\n".join([line for line in last_output.split("\n") if "Summary" in line]) | |
| else: | |
| # Fetch and retrieve papers for new query | |
| titles, abstracts, paper_ids = data_ingestion.fetch_papers(query) | |
| if not abstracts: | |
| return "No papers found after query expansion." | |
| retrieval_module.build_vector_store(abstracts, titles, paper_ids) | |
| retrieved = retrieval_module.retrieve_relevant(query) | |
| if not retrieved: | |
| return "No relevant papers retrieved." | |
| retrieved_abstracts = [item[0] for item in retrieved] | |
| retrieved_metadata = [item[1] for item in retrieved] | |
| context = "\n".join(retrieved_abstracts) | |
| memory.save_context({"input": "Retrieved papers"}, {"output": context}) | |
| # Generate a concise summary of the best papers | |
| prompt = f"Summarize the best research papers on {query} based on these abstracts:\n{context}" | |
| summary = generator(prompt, max_new_tokens=100, num_return_sequences=1, truncation=True)[0]["generated_text"] | |
| # Include sources if not a follow-up | |
| if "more" not in query.lower(): | |
| papers_ref = "\n".join([f"- {m['title']} ([link](https://export.arxiv.org/abs/{m['paper_id']}))" for m in retrieved_metadata]) | |
| full_output = f"📜 **Summary of Best Papers on {query}:**\n{summary}\n\n**Sources:**\n{papers_ref}" | |
| else: | |
| full_output = f"📜 **More on {query}:**\n{summary}" | |
| memory.save_context({"input": query}, {"output": full_output}) | |
| return full_output | |
| except Exception as e: | |
| logger.error(f"Error: {str(e)}") | |
| return f"Error: {str(e)}" | |
| # --- Gradio Interface --- | |
| demo = gr.Interface( | |
| fn=process_query, | |
| inputs=gr.Textbox(label="Enter your research query (e.g., 'RAG' or 'Tell me more')"), | |
| outputs=gr.Textbox(label="Result"), | |
| title="AI Research Buddy", | |
| description="Retrieve summaries of the best papers on your topic with their sources. Ask follow-ups like 'Tell me more.'" | |
| ) | |
| if __name__ == "__main__": | |
| demo.launch() |