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README.md
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<h1 align="center"> Precious3GPT </h1>
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<h3 align="center"> A multimodal multi-omics multi-species multi-tissue
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<p align="center">
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📃 <a href="https://doi.org/10.1101/2024.07.25.605062" target="_blank">Pre-print</a> • 👾 <a href="https://discord.gg/P4PWFNbYFg" target="_blank">Discord bot</a> • 🧬 <a href="https://insilico.com/repository/precious3gpt" target="_blank">Validation digest</a>
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<h1 align="center"> Model summary </h1>
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- Precious3GPT (P3GPT) is a unique
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- P3GPT simulates biological processes on an omics level to return the transcriptomic, epigenetic, or proteomic signatures of a wide variety of perturbators;
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- You may work with P3GPT either by downloading model weights for a local deployment or by interacting with the Discord bot on the official Inisilico Medicine's server.
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<h1 align="center"> Model usage guide </h1>
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### Run model with an endpoint
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<h1 align="center"> Precious3GPT </h1>
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<h3 align="center"> A multimodal multi-omics multi-species multi-tissue Large Language of Life Model (LLLM/LLoLM). </h3>
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<p align="center">
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📃 <a href="https://doi.org/10.1101/2024.07.25.605062" target="_blank">Pre-print</a> • 👾 <a href="https://discord.gg/P4PWFNbYFg" target="_blank">Discord bot</a> • 🧬 <a href="https://insilico.com/repository/precious3gpt" target="_blank">Validation digest</a>
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<h1 align="center"> Model summary </h1>
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- Precious3GPT (P3GPT) is a unique Large Language of Life Model (LLLM/LLoLM) that has been trained on 1.2MM omics data points, knowledge graphs, and biomedical texts (PubMed) to be used in drug discovery and aging research;
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- P3GPT simulates biological processes on an omics level to return the transcriptomic, epigenetic, or proteomic signatures of a wide variety of perturbators;
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- You may work with P3GPT either by downloading model weights for a local deployment or by interacting with the Discord bot on the official Inisilico Medicine's server.
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- Download the model with:
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```python
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from transformers import AutoTokenizer, AutoModelForCausalLM
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tokenizer = AutoTokenizer.from_pretrained("insilicomedicine/precious3-gpt-multi-modal", trust_remote_code=True)
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model = AutoModelForCausalLM.from_pretrained("insilicomedicine/precious3-gpt-multi-modal", trust_remote_code=True)
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```
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<h1 align="center"> Model usage guide </h1>
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### Run model with an endpoint
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