Add 'sagan-mc-spectra-16k' config data files
Browse files
README.md
CHANGED
|
@@ -11,7 +11,7 @@ pretty_name: SaganMC
|
|
| 11 |
size_categories:
|
| 12 |
- 100K<n<1M
|
| 13 |
dataset_info:
|
| 14 |
-
|
| 15 |
features:
|
| 16 |
- name: inchi
|
| 17 |
dtype: string
|
|
@@ -102,6 +102,97 @@ dataset_info:
|
|
| 102 |
num_examples: 40533
|
| 103 |
download_size: 121350317
|
| 104 |
dataset_size: 327643347
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 105 |
configs:
|
| 106 |
- config_name: sagan-mc-400k
|
| 107 |
data_files:
|
|
@@ -112,6 +203,14 @@ configs:
|
|
| 112 |
- split: test
|
| 113 |
path: sagan-mc-400k/test-*
|
| 114 |
default: true
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 115 |
---
|
| 116 |
# SaganMC: A Molecular Complexity Dataset with Mass Spectra
|
| 117 |
|
|
|
|
| 11 |
size_categories:
|
| 12 |
- 100K<n<1M
|
| 13 |
dataset_info:
|
| 14 |
+
- config_name: sagan-mc-400k
|
| 15 |
features:
|
| 16 |
- name: inchi
|
| 17 |
dtype: string
|
|
|
|
| 102 |
num_examples: 40533
|
| 103 |
download_size: 121350317
|
| 104 |
dataset_size: 327643347
|
| 105 |
+
- config_name: sagan-mc-spectra-16k
|
| 106 |
+
features:
|
| 107 |
+
- name: inchi
|
| 108 |
+
dtype: string
|
| 109 |
+
- name: inchikey
|
| 110 |
+
dtype: string
|
| 111 |
+
- name: selfies
|
| 112 |
+
dtype: string
|
| 113 |
+
- name: smiles
|
| 114 |
+
dtype: string
|
| 115 |
+
- name: smiles_scaffold
|
| 116 |
+
dtype: string
|
| 117 |
+
- name: formula
|
| 118 |
+
dtype: string
|
| 119 |
+
- name: fingerprint_morgan
|
| 120 |
+
dtype: string
|
| 121 |
+
- name: num_atoms
|
| 122 |
+
dtype: int32
|
| 123 |
+
- name: num_atoms_all
|
| 124 |
+
dtype: int32
|
| 125 |
+
- name: num_bonds
|
| 126 |
+
dtype: int32
|
| 127 |
+
- name: num_bonds_all
|
| 128 |
+
dtype: int32
|
| 129 |
+
- name: num_rings
|
| 130 |
+
dtype: int32
|
| 131 |
+
- name: num_aromatic_rings
|
| 132 |
+
dtype: int32
|
| 133 |
+
- name: physchem_mol_weight
|
| 134 |
+
dtype: float32
|
| 135 |
+
- name: physchem_logp
|
| 136 |
+
dtype: float32
|
| 137 |
+
- name: physchem_tpsa
|
| 138 |
+
dtype: float32
|
| 139 |
+
- name: physchem_qed
|
| 140 |
+
dtype: float32
|
| 141 |
+
- name: physchem_h_acceptors
|
| 142 |
+
dtype: int32
|
| 143 |
+
- name: physchem_h_donors
|
| 144 |
+
dtype: int32
|
| 145 |
+
- name: physchem_rotatable_bonds
|
| 146 |
+
dtype: int32
|
| 147 |
+
- name: physchem_fraction_csp3
|
| 148 |
+
dtype: float32
|
| 149 |
+
- name: mass_spectrum_nist
|
| 150 |
+
dtype: string
|
| 151 |
+
- name: complex_ma_score
|
| 152 |
+
dtype: int32
|
| 153 |
+
- name: complex_ma_runtime
|
| 154 |
+
dtype: float32
|
| 155 |
+
- name: complex_bertz_score
|
| 156 |
+
dtype: float32
|
| 157 |
+
- name: complex_bertz_runtime
|
| 158 |
+
dtype: float32
|
| 159 |
+
- name: complex_boettcher_score
|
| 160 |
+
dtype: float32
|
| 161 |
+
- name: complex_boettcher_runtime
|
| 162 |
+
dtype: float32
|
| 163 |
+
- name: synth_sa_score
|
| 164 |
+
dtype: float32
|
| 165 |
+
- name: meta_cas_number
|
| 166 |
+
dtype: string
|
| 167 |
+
- name: meta_names
|
| 168 |
+
dtype: string
|
| 169 |
+
- name: meta_iupac_name
|
| 170 |
+
dtype: string
|
| 171 |
+
- name: meta_comment
|
| 172 |
+
dtype: string
|
| 173 |
+
- name: meta_origin
|
| 174 |
+
dtype: string
|
| 175 |
+
- name: meta_reference
|
| 176 |
+
dtype: string
|
| 177 |
+
- name: split
|
| 178 |
+
dtype:
|
| 179 |
+
class_label:
|
| 180 |
+
names:
|
| 181 |
+
'0': train
|
| 182 |
+
'1': val
|
| 183 |
+
'2': test
|
| 184 |
+
splits:
|
| 185 |
+
- name: train
|
| 186 |
+
num_bytes: 31175057
|
| 187 |
+
num_examples: 13297
|
| 188 |
+
- name: validation
|
| 189 |
+
num_bytes: 3829030
|
| 190 |
+
num_examples: 1634
|
| 191 |
+
- name: test
|
| 192 |
+
num_bytes: 4067843
|
| 193 |
+
num_examples: 1722
|
| 194 |
+
download_size: 17763908
|
| 195 |
+
dataset_size: 39071930
|
| 196 |
configs:
|
| 197 |
- config_name: sagan-mc-400k
|
| 198 |
data_files:
|
|
|
|
| 203 |
- split: test
|
| 204 |
path: sagan-mc-400k/test-*
|
| 205 |
default: true
|
| 206 |
+
- config_name: sagan-mc-spectra-16k
|
| 207 |
+
data_files:
|
| 208 |
+
- split: train
|
| 209 |
+
path: sagan-mc-spectra-16k/train-*
|
| 210 |
+
- split: validation
|
| 211 |
+
path: sagan-mc-spectra-16k/validation-*
|
| 212 |
+
- split: test
|
| 213 |
+
path: sagan-mc-spectra-16k/test-*
|
| 214 |
---
|
| 215 |
# SaganMC: A Molecular Complexity Dataset with Mass Spectra
|
| 216 |
|
sagan-mc-spectra-16k/test-00000-of-00001.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:5f37d79d7c857941db7e40cfe17d2a9db65890555f52308281e2be1986443e77
|
| 3 |
+
size 1865086
|
sagan-mc-spectra-16k/train-00000-of-00001.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4a34bca85f946ba882c9e73eb756bd9c3a36e1fd6294d88f3c023a719ae86dec
|
| 3 |
+
size 14140579
|
sagan-mc-spectra-16k/validation-00000-of-00001.parquet
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:3c35234c9839c99a3957030279669f980e9ede34be3be881d570c842be63e43e
|
| 3 |
+
size 1758243
|