Datasets:
Update README.md
Browse files
README.md
CHANGED
|
@@ -1,3 +1,53 @@
|
|
| 1 |
-
---
|
| 2 |
-
license: apache-2.0
|
| 3 |
-
---
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
---
|
| 2 |
+
license: apache-2.0
|
| 3 |
+
---
|
| 4 |
+
|
| 5 |
+
|
| 6 |
+
---
|
| 7 |
+
|
| 8 |
+
## 📄 `README.md` for **DDInter**
|
| 9 |
+
|
| 10 |
+
```markdown
|
| 11 |
+
---
|
| 12 |
+
pretty_name: DDInter Inductive Reasoning
|
| 13 |
+
annotations_creators:
|
| 14 |
+
- no-annotation
|
| 15 |
+
language:
|
| 16 |
+
- en
|
| 17 |
+
task_categories:
|
| 18 |
+
- reasoning
|
| 19 |
+
- relation-classification
|
| 20 |
+
license: mit
|
| 21 |
+
---
|
| 22 |
+
|
| 23 |
+
### Dataset Summary
|
| 24 |
+
|
| 25 |
+
DDInter provides drug-drug interaction data labeled with three severity levels (e.g., 'Major','Moderate' and 'Minor').
|
| 26 |
+
Each example includes descriptions for both drugs, interaction label, and multi-hop paths extracted from a biomedical knowledge graph (Hetionet).
|
| 27 |
+
|
| 28 |
+
This dataset supports research in biomedical relational inductive reasoning, DDI prediction, and path-based inference.
|
| 29 |
+
|
| 30 |
+
### Columns
|
| 31 |
+
|
| 32 |
+
| Column | Description |
|
| 33 |
+
|--------|-------------|
|
| 34 |
+
| `drug1_db`, `drug2_db` | DrugBank IDs |
|
| 35 |
+
| `drug1_id`, `drug2_id` | Node IDs |
|
| 36 |
+
| `drug_pair` | Optional pair ID |
|
| 37 |
+
| `drug1_name`, `drug2_name` | Drug names |
|
| 38 |
+
| `drug1_desc`, `drug2_desc` | Descriptions of each drug |
|
| 39 |
+
| `label` | Interaction severity (e.g., Moderate) |
|
| 40 |
+
| `label_idx` | Numeric label |
|
| 41 |
+
| `all_paths`, `all_paths_str`, `path_str` | Paths from the knowledge graph |
|
| 42 |
+
|
| 43 |
+
### Example
|
| 44 |
+
|
| 45 |
+
```json
|
| 46 |
+
{
|
| 47 |
+
"drug1_name": "Mannitol",
|
| 48 |
+
"drug2_name": "Castor oil",
|
| 49 |
+
"label": "Moderate",
|
| 50 |
+
"path_str": "Mannitol (Compound) binds ABCB1 (Gene) and ABCG2 (Gene)..."
|
| 51 |
+
}
|
| 52 |
+
|
| 53 |
+
Use the pandas option to load the dataset
|